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1. Iterative Reconstruction of Transcriptional Regulatory Networks: An Algorithmic Approach

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1463018
http://www.ncbi.nlm.nih.gov/pubmed/16710450  
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2. Genome-Scale In Silico Models of E. coli Have Multiple Equivalent Phenotypic States: Assessment of Correlated Reaction Subsets That Comprise Network States

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC515326
http://www.ncbi.nlm.nih.gov/pubmed/15342562  
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3. Thirteen Years of Building Constraint-Based In Silico Models of Escherichia coli

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC154396
http://www.ncbi.nlm.nih.gov/pubmed/12700248  
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4. expa: a program for calculating extreme pathways in biochemical reaction networks


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5. Genome-Scale In Silico Models of E. coli Have Multiple Equivalent Phenotypic States: Assessment of Correlated Reaction Subsets That Comprise Network States


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6. Comparison of ornidazole and tinidazole in single-dose treatment of trichomoniasis in women.

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7. Comparison of ornidazole and tinidazole in single-dose treatment of trichomoniasis in women.


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8. Sensitive and accurate identification of protein-DNA binding events in ChIP-chip assays using higher order derivative analysis


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9. Network-level analysis of metabolic regulation in the human red blood cell using random sampling and singular value decomposition


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10. Network-level analysis of metabolic regulation in the human red blood cell using random sampling and singular value decomposition

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1421444
http://www.ncbi.nlm.nih.gov/pubmed/16533395  
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